STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2830Ubiquinol--cytochrome c reductase, cytochrome c1. (270 aa)    
Predicted Functional Partners:
petA
Ubiquinol-cytochrome c reductase, iron-sulfur subunit.
 
 0.999
EIO_2828
Ubiquinol--cytochrome c reductase, cytochrome B.
 0.999
fbcB
Cytochrome b.
 0.999
nuoF
NADH dehydrogenase I subunit F.
  
 
 0.993
EIO_2274
NADH dehydrogenase subunit I.
  
 
 0.992
EIO_0772
Cytochrome c oxidase, subunit III.
 
 0.991
EIO_2276
NADH dehydrogenase (quinone), g subunit.
  
 
 0.990
nuoE
ATP synthase subunit E.
  
 
 0.989
EIO_0898
Cytochrome c, class I.
 
 0.987
nuoD
NADH dehydrogenase I, D subunit.
  
 
 0.987
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.