Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EIO_2833Binding-protein-dependent transport systems inner membrane component. (504 aa)    
Predicted Functional Partners:
tbpA
Thiamin transporter substrate binding subunit.
 
 
 0.996
EIO_2831
Sulfate/thiosulfate import ATP-binding protein CysA.
 
  
  0.978
lolD
ABC lipoprotein efflux transporter, ATPase subunit, LolD.
  
 
  0.745
EIO_0053
Inner membrane protein ybbM.
   
 
  0.742
EIO_2358
Molybdate ABC transporter, permease protein.
   
 
  0.740
EIO_0052
Putative ferric cations import ATP-binding protein fbpC.
     
  0.737
EIO_0349
Cysteine ABC transporter permease/ATP-binding protein.
     
  0.737
cydD
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD.
     
  0.737
ccmA
ABC heme exporter, ATPase subunt CcmA.
     
  0.737
ccmB
Heme exporter protein CcmB.
     
  0.737
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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