Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EIO_2835Chorismate synthase. (367 aa)    
Predicted Functional Partners:
EIO_0544
3-phosphoshikimate 1-carboxyvinyltransferase protein.
 
 0.999
EIO_1082
3-dehydroquinate synthase.
  
 0.987
EIO_0086
Chorismate mutase.
  
 
 0.976
trpE
Anthranilate synthase component I.
 
 
 0.971
trpG
Anthranilate synthase component II.
 
 
 0.962
aroE
Shikimate 5-dehydrogenase.
  
 0.940
aroK
Shikimate kinase.
 
  
 0.877
EIO_0915
Cyclohexadienyl dehydrogenase.
  
  
 0.852
EIO_0732
Tryptophan synthase, alpha subunit.
  
  
 0.803
EIO_0027
Putative shikimate/quinate 5-dehydrogenase.
 
  
 0.771
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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