STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zapEType I secretion target repeat protein. (336 aa)    
Predicted Functional Partners:
EIO_0131
Hemolysin-type calcium-binding region.
 
 0.887
EIO_2507
Hemolysin-type calcium-binding region.
 
 0.860
EIO_2117
Hemolysin-type calcium-binding region.
 
 0.843
EIO_0135
Hemolysin-type calcium-binding region.
 
 0.793
EIO_0140
Hemolysin-type calcium-binding region.
 
 0.684
EIO_0345
Type I secretion target repeat protein.
 
 0.610
EIO_2516
Alkaline phosphatase.
      0.604
truB
tRNA pseudouridine synthase B.
       0.533
EIO_0056
Conserved hypothetical protein.
  
 0.510
EIO_0168
Conserved hypothetical protein.
  
 0.503
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.