STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2863Conserved hypothetical protein. (262 aa)    
Predicted Functional Partners:
EIO_2861
Conserved hypothetical protein.
       0.793
EIO_2862
ATP-dependent DNA helicase RecQ.
       0.793
EIO_2864
ABC multidrug efflux transporter, fused ATPase and inner membrane subunits.
       0.606
mepA
Penicillin-insensitive murein endopeptidase.
       0.540
EIO_2859
Conserved hypothetical protein.
       0.507
EIO_0647
Riboflavin biosynthesis protein RibD.
       0.477
EIO_0358
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein.
 
     0.446
EIO_0901
Oligopeptide/dipeptide uptake family ABC transporter, permease protein.
   
    0.410
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.