STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2864ABC multidrug efflux transporter, fused ATPase and inner membrane subunits. (567 aa)    
Predicted Functional Partners:
EIO_0758
ABC basic amino acid transporter, ATPase subunit.
 
   
 
0.903
EIO_0538
ABC transporter related protein.
 
   
 
0.808
lpxK
Tetraacyldisaccharide 4'-kinase.
 
  
 0.648
EIO_2841
Chaperone protein DnaK.
 
 0.633
EIO_1362
ABC transporter, ATP-binding/permease protein.
  
 
0.614
EIO_2863
Conserved hypothetical protein.
       0.606
EIO_2861
Conserved hypothetical protein.
       0.543
EIO_2862
ATP-dependent DNA helicase RecQ.
  
    0.542
adhC
Putative alcohol dehydrogenase class-III.
   
  0.499
EIO_1140
Malonyl CoA-acyl carrier protein transacylase.
  
 0.494
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: medium (72%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.