STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF96814.1O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis. Belongs to the SepSecS family. (435 aa)    
Predicted Functional Partners:
AEF95723.1
TIGRFAM: L-seryl-tRNA(Sec)kinase, archaea; KEGG: mja:MJ_1538 chromatin associated protein KTI12.
  
  
 0.997
AEF96631.1
TIGRFAM: Pyridoxal phosphate-dependent transferase, archaea; KEGG: mfs:MFS40622_0115 pyridoxal phosphate enzyme.
     
 0.966
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
 
  
 0.955
AEF95892.1
KEGG: mfe:Mefer_0717 selenocysteine-specific translation elongation factor; TIGRFAM: Translation elongation factor, selenocysteine-specific; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2.
 
   
 0.868
AEF96880.1
O-phospho-L-seryl-tRNA:Cys-tRNA synthase; Converts O-phospho-L-seryl-tRNA(Cys) (Sep-tRNA(Cys)) to L- cysteinyl-tRNA(Cys) (Cys-tRNA(Cys)); Belongs to the SepCysS family.
      
 0.857
serS
Type-2 seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec); Belongs to the class-II aminoacyl-tRNA synthetase family. Type-2 seryl-tRNA synthetase subfamily.
      
 0.774
AEF96813.1
Phosphonopyruvate decarboxylase-related protein; TIGRFAM: Cofactor-independent phosphoglycerate mutase, archaeal; KEGG: mif:Metin_0667 phosphonopyruvate decarboxylase-related protein; PFAM: Bisphosphoglycerate-independent phosphoglycerate mutase; Metalloenzyme.
       0.718
AEF96811.1
PFAM: Xylose isomerase, TIM barrel domain; KEGG: mif:Metin_0665 xylose isomerase domain protein TIM barrel.
       0.492
AEF96812.1
KEGG: mif:Metin_0666 hypothetical protein.
       0.492
AEF95599.1
PFAM: AIR synthase-related protein, C-terminal; AIR synthase-related protein; KEGG: mmx:MmarC6_1773 AIR synthase-like protein.
  
   
 0.451
Your Current Organism:
Methanotorris igneus
NCBI taxonomy Id: 880724
Other names: M. igneus Kol 5, Methanotorris igneus DSM 5666, Methanotorris igneus JCM 11834, Methanotorris igneus Kol 5, Methanotorris igneus str. Kol 5, Methanotorris igneus strain Kol 5
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.