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DVU_0034 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0034" - DSBA-like thioredoxin domain protein in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
DVU_0034DSBA-like thioredoxin domain protein; Identified by match to protein family HMM PF01323 (261 aa)    
Predicted Functional Partners:
DVU_0999
Thio-disulfide interchange protein, putative; Identified by similarity to SP-P36655; match to protein family HMM PF02683 (719 aa)
 
 
  0.873
DVU_0283
AhpF family protein/thioredoxin reductase; Identified by similarity to SP-P80880; match to protein family HMM PF00070; match to protein family HMM TIGR01292; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family (661 aa)
   
 
  0.793
secY
Protein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently (437 aa)
   
 
  0.635
DVU_1586
Thioredoxin family protein; Identified by similarity to SP-P36893 (155 aa)
   
 
  0.632
DVU_0378
Thioredoxin, putative; Identified by similarity to SP-P80579 (104 aa)
   
 
  0.632
secG
Preprotein translocase, SecG subunit; Identified by similarity to SP-P33582; match to protein family HMM PF03840 (116 aa)
   
 
 
  0.624
secE
Protein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation (83 aa)
       
 
  0.605
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
     
 
  0.600
DVU_1368
Rhodanese-like domain protein; Identified by match to protein family HMM PF00581 (540 aa)
   
 
  0.587
rplA
50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release (235 aa)
       
      0.540
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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