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DVU_0062 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0062" - RND efflux system, outer membrane protein, NodT family in Desulfovibrio vulgaris Hildenborough
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0062RND efflux system, outer membrane protein, NodT family; Identified by similarity to SP-Q51487; match to protein family HMM PF02321; match to protein family HMM TIGR01845 (504 aa)    
Predicted Functional Partners:
DVU_0061
Efflux pump membrane transporter; Identified by similarity to GP-18496807; match to protein family HMM PF00873; match to protein family HMM TIGR00915 (1046 aa)
  0.996
DVU_0060
Efflux transporter, RND family, MFP subunit; Identified by similarity to SP-P31223; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (394 aa)
 
  0.996
DVU_2816
Efflux pump membrane transporter; Identified by similarity to SP-P31224; match to protein family HMM PF00873; match to protein family HMM TIGR00915 (1070 aa)
  0.981
DVU_2817
Multidrug resistance protein; Identified by similarity to SP-P31223; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (417 aa)
  0.975
DVU_3248
Efflux pump membrane transporter; Identified by similarity to GP-1707645; match to protein family HMM PF00873; match to protein family HMM TIGR00915 (1047 aa)
 
  0.899
DVU_3247
Efflux transporter, RND family, MFP subunit; Identified by similarity to GP-1707644; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (389 aa)
 
 
  0.878
DVU_0437
Efflux transporter, RND family, MFP subunit; Identified by similarity to SP-P76397; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (486 aa)
 
 
  0.859
DVU_3097
Outer membrane efflux protein; Identified by match to protein family HMM PF02321 (439 aa)
   
   
 
0.814
DVU_0059
Identified by match to protein family HMM PF00873 (1236 aa)
 
 
  0.807
DVU_2439
Efflux transporter, RND family, MFP subunit; Identified by similarity to SP-P75830; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (411 aa)
 
 
  0.806
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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