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DVU_0064 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0064" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Experiments
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[Homology]
Score
DVU_0064Uncharacterized protein; Identified by Glimmer2; putative (302 aa)    
Predicted Functional Partners:
DVU_3333
Uncharacterized protein; Identified by Glimmer2; putative (152 aa)
   
          0.774
DVU_1136
Host-nuclease inhibitor protein Gam, putative; Identified by similarity to SP-P06023 (170 aa)
   
          0.716
DVU_3175
annotation not available (67 aa)
   
          0.694
DVU_0859
Uncharacterized protein; Identified by Glimmer2; putative (491 aa)
   
          0.691
DVU_1140
Bacteriophage transposase A protein, putative; Identified by similarity to SP-P07636 (717 aa)
   
          0.641
DVU_1435
Membrane protein, putative; Identified by similarity to OMNI-NTL03PA01784 (394 aa)
   
          0.640
DVU_0263
Acidic cytochrome c3; Identified by similarity to SP-P94690 (126 aa)
   
          0.637
DVU_0266
Uncharacterized protein; Identified by Glimmer2; putative (408 aa)
   
          0.631
DVU_1952
Uncharacterized protein; Identified by Glimmer2; putative (231 aa)
   
          0.629
DVU_2483
Cytochrome c family protein; Identified by similarity to SP-P00135; match to protein family HMM PF02085 (581 aa)
   
          0.623
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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