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DVU_0100 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0100" - TonB-dependent receptor in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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DVU_0100TonB-dependent receptor; Identified by match to protein family HMM PF00593 (649 aa)    
Predicted Functional Partners:
DVU_0099
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (386 aa)
 
 
  0.905
DVU_0102
Cation ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF01297 (330 aa)
 
     
  0.762
kdpB
Potassium-transporting ATPase ATP-binding subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily (678 aa)
     
        0.705
DVU_3254
PDZ domain protein; Identified by match to protein family HMM PF00595 (454 aa)
   
   
  0.700
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (304 aa)
     
        0.679
DVU_0101
Methlytransferase, UbiE/COQ5 family; Identified by match to protein family HMM PF01209 (508 aa)
              0.662
priA
Primosomal protein N’; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA (792 aa)
     
        0.659
DVU_1585
Vitamin B12-dependent methionine synthase family protein; Identified by similarity to SP-P37586; match to protein family HMM PF00809; match to protein family HMM PF02310; match to protein family HMM PF02574; match to protein family HMM PF02607 (804 aa)
         
  0.649
DVU_3102
Uncharacterized protein; Identified by Glimmer2; putative (195 aa)
   
 
  0.646
DVU_3101
TonB protein, putative; Identified by similarity to GP-14595286; match to protein family HMM TIGR01352 (341 aa)
   
 
  0.646
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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