Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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DVU_0102Cation ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF01297. (330 aa)    
Predicted Functional Partners:
DVU_0104
Cation ABC transporter, permease protein, putative; Identified by similarity to SP:P44661; match to protein family HMM PF00950.
 
 
 0.995
DVU_0103
Cation ABC transporter, ATP-binding protein, putative; Identified by similarity to OMNI:NTL02SC0434; match to protein family HMM PF00005.
 
  
 0.981
DVU_1342
Cation ABC transporter, ATP-binding protein, putative; Identified by similarity to SP:Q9XDA6; match to protein family HMM PF00005.
 
 
 0.965
DVU_1341
Cation ABC transporter, permease protein; Identified by similarity to GP:5019735; match to protein family HMM PF00950.
 
 
 0.949
DVU_1343
Cation ABC transporter, periplasmc-binding protein; Identified by match to protein family HMM PF01297.
  
  
  0.916
DVU_0100
TonB-dependent receptor; Identified by match to protein family HMM PF00593.
 
  
 0.874
DVU_2491
ABC transporter, ATP-binding protein; Identified by similarity to SP:P31060; match to protein family HMM PF00005.
  
  
 0.811
DVU_0099
TonB domain protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
  
 0.783
DVU_0949
Conserved domain protein; Identified by similarity to OMNI:NMB1475.
  
  
 0.762
DVU_0079
ZIP zinc transporter family protein; Identified by similarity to SP:Q06916; match to protein family HMM PF02535.
     
 0.718
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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