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DVU_0112 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0112" - Deoxyribodipyrimidine photolyase, putative in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_0112Deoxyribodipyrimidine photolyase, putative; Identified by similarity to SP-P05327; match to protein family HMM PF00875; match to protein family HMM PF03441 (474 aa)    
Predicted Functional Partners:
DVU_0111
Response regulator; Identified by match to protein family HMM PF00072 (268 aa)
         
  0.846
DVU_2976
Uncharacterized protein; Identified by similarity to OMNI-NT01MC0831; match to protein family HMM PF04463 (370 aa)
   
   
  0.820
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
   
   
  0.725
cysK
Cysteine synthase; Identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01139; Belongs to the cysteine synthase/cystathionine beta- synthase family (308 aa)
 
 
      0.592
poR
Pyruvate synthase; Identified by similarity to GP-1770208; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855 (1215 aa)
   
        0.590
DVU_0478
Identified by match to protein family HMM PF00149 (287 aa)
   
 
  0.549
uvrC
UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5’ and 3’ sides of the lesion. The N-terminal half is responsible for the 3’ incision and the C-terminal half is responsible for the 5’ incision (702 aa)
   
   
  0.531
recA
Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (357 aa)
     
 
  0.531
DVU_0110
Sigma-54 dependent transcriptional regulator/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR01199 (476 aa)
              0.525
DVU_0109
Sensor histidine kinase; Identified by similarity to SP-P14377; match to protein family HMM PF00512; match to protein family HMM PF02518 (410 aa)
              0.525
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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