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DVU_0166 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0166" - Oligopeptide/dipeptide ABC transporter, ATP-binding protein in Desulfovibrio vulgaris Hildenborough
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0166Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily (328 aa)    
Predicted Functional Partners:
DVU_0167
Oligopeptide/dipeptide ABC transporter, permease protein; Identified by match to protein family HMM PF00528 (306 aa)
  0.997
DVU_0168
Oligopeptide/dipeptide ABC transporter, permease protein; Identified by match to protein family HMM PF00528 (325 aa)
  0.995
DVU_0165
Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by similarity to SP-P42065; match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily (337 aa)
 
0.989
DVU_2462
Oligopeptide ABC transporter, permease protein; Identified by similarity to SP-P42063; match to protein family HMM PF00528 (300 aa)
  0.987
DVU_0169
Oligopeptide/dipeptide ABC transporter, periplasmic oligopeptide/dipeptide-binding protein; Identified by match to protein family HMM PF00496 (520 aa)
  0.972
DVU_2461
Oligopeptide ABC transporter, permease protein; Identified by similarity to SP-P42062; match to protein family HMM PF00528 (339 aa)
  0.972
DVU_2084
Oligopeptide-binding protein, putative; Identified by similarity to SP-P42061; match to protein family HMM PF00496 (565 aa)
  0.937
DVU_2576
Oligopeptide ABC transporter, ATP-binding protein; Identified by similarity to SP-P42064; match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily (321 aa)
   
   
 
0.814
ispD
Bifunctional enzyme IspD/IspF; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF); In the N-terminal section; belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily (395 aa)
   
   
  0.566
DVU_2386
ABC transporter, permease protein; Identified by match to protein family HMM PF00528 (343 aa)
     
  0.539
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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