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modC protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"modC" - Molybdenum ABC transporter, ATP-binding protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
modCMolybdenum ABC transporter, ATP-binding protein; Identified by similarity to SP-P37732; match to protein family HMM PF00005 (253 aa)    
Predicted Functional Partners:
modB
Molybdenum ABC transporter, permease protein; Identified by similarity to SP-P09834; match to protein family HMM PF00528; match to protein family HMM TIGR01095 (233 aa)
   
  0.991
modA
Molybdenum ABC transporter, periplasmic molybdenum-binding protein; Identified by similarity to SP-P37329; match to protein family HMM PF01547; match to protein family HMM TIGR01256 (269 aa)
   
  0.908
DVU_2491
ABC transporter, ATP-binding protein; Identified by similarity to SP-P31060; match to protein family HMM PF00005 (632 aa)
 
 
0.825
DVU_3072
ABC transporter, permease protein, putative; Identified by similarity to SP-P76224; match to protein family HMM PF00528 (644 aa)
 
 
  0.811
DVU_3163
ABC transporter, permease protein; Identified by similarity to OMNI-NTL01LI0216; match to protein family HMM PF00528 (293 aa)
 
 
  0.644
DVU_3164
ABC transporter, permease protein; Identified by similarity to OMNI-TM0598; match to protein family HMM PF00528 (277 aa)
 
 
  0.631
DVU_3162
ABC transporter, periplasmic substrate-binding protein; Identified by similarity to SP-P10904; match to protein family HMM PF01547 (431 aa)
 
 
  0.601
potB
Polyamine ABC transporter, permease protein; Identified by similarity to SP-P23860; match to protein family HMM PF00528 (295 aa)
 
  0.552
cysS
Cysteine--tRNA ligase; Identified by similarity to SP-Q06752; match to protein family HMM PF01406; match to protein family HMM TIGR00435; Belongs to the class-I aminoacyl-tRNA synthetase family (485 aa)
          0.543
ftsY
Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components (488 aa)
 
      0.521
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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