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DVU_0208 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0208" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0208Uncharacterized protein; Identified by Glimmer2; putative (185 aa)    
Predicted Functional Partners:
DVU_0210
Tail sheath protein, putative; Identified by similarity to SP-P79678 (487 aa)
              0.851
AAS94693.1
Identified by similarity to GP-1834290 (63 aa)
              0.848
AAS94691.1
Identified by Glimmer2; putative (108 aa)
              0.845
AAS94690.1
Identified by Glimmer2; putative (197 aa)
              0.845
DVU_0205
Uncharacterized protein; Identified by Glimmer2; putative (55 aa)
              0.845
DVU_0204
annotation not available (136 aa)
              0.845
DVU_0203
Identified by match to protein family HMM PF05838 (182 aa)
              0.796
DVU_0202
Holin; Identified by match to protein family HMM TIGR01593 (162 aa)
              0.738
DVU_0201
Uncharacterized protein; Identified by Glimmer2; putative (106 aa)
              0.738
AAS94684.1
Identified by match to protein family HMM PF03864 (334 aa)
              0.735
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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