STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0219Tail protein, putative; Identified by similarity to GP:19483737. (208 aa)    
Predicted Functional Partners:
DVU_0215
Tail protein, putative; Identified by similarity to SP:P08558.
    0.967
DVU_0218
Tail protein, putative; Identified by similarity to GP:19483757.
    0.967
DVU_0216
Phage baseplate assembly protein V, putative; Identified by match to protein family HMM TIGR01644.
 
    0.963
DVU_0210
Tail sheath protein, putative; Identified by similarity to SP:P79678.
 
    0.961
DVU_0217
Tail protein, putative; Identified by similarity to GP:19483756.
 
    0.960
DVU_0214
tail/DNA circulation protein, putative; Identified by similarity to GP:19483753.
 
    0.900
DVU_2851
Tail protein, putative; Identified by similarity to GP:19483757.
    0.874
DVU_2859
Tail sheath protein, putative; Identified by similarity to SP:P79678.
 
    0.846
DVU_2854
Tail protein, putative; Identified by similarity to SP:P08558.
    0.840
DVU_2849
Tail fiber protein, putative.
 
  
 0.825
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.