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DVU_0220 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0220" - annotation not available in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0220annotation not available (338 aa)    
Predicted Functional Partners:
DVU_0219
Tail protein, putative; Identified by similarity to GP-19483737 (208 aa)
 
          0.964
DVU_0218
Tail protein, putative; Identified by similarity to GP-19483757 (353 aa)
 
        0.963
DVU_0216
Phage baseplate assembly protein V, putative; Identified by match to protein family HMM TIGR01644 (212 aa)
 
          0.962
DVU_0215
Tail protein, putative; Identified by similarity to SP-P08558 (377 aa)
 
          0.961
DVU_0217
Tail protein, putative; Identified by similarity to GP-19483756 (158 aa)
 
          0.961
DVU_0214
Tail/DNA circulation protein, putative; Identified by similarity to GP-19483753 (399 aa)
 
          0.890
DVU_0221
annotation not available (147 aa)
              0.837
AAS94695.1
Identified by similarity to SP-P79679 (121 aa)
 
          0.829
DVU_0210
Tail sheath protein, putative; Identified by similarity to SP-P79678 (487 aa)
 
          0.829
DVU_2722
Uncharacterized protein; Identified by similarity to OMNI-NTL01NM01712 (446 aa)
 
          0.827
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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