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DVU_0223 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0223" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0223Uncharacterized protein; Identified by similarity to OMNI-NTL02MA0751 (60 aa)    
Predicted Functional Partners:
DVU_0224
Uncharacterized protein; Identified by similarity to OMNI-CC3185 (131 aa)
     
 
  0.895
DVU_3255
Transcriptional regulator, CopG family; Identified by match to protein family HMM PF01402 (132 aa)
     
 
  0.669
DVU_0222
Uncharacterized protein; Identified by Glimmer2; putative (109 aa)
              0.573
DVU_0221
annotation not available (147 aa)
              0.561
DVU_0220
annotation not available (338 aa)
              0.556
DVU_0219
Tail protein, putative; Identified by similarity to GP-19483737 (208 aa)
              0.556
nikR
Putative nickel-responsive regulator; Transcriptional regulator (139 aa)
     
 
  0.555
DVU_1764
Uncharacterized protein; Identified by similarity to OMNI-NTL01TT1482 (89 aa)
     
 
  0.555
DVU_0218
Tail protein, putative; Identified by similarity to GP-19483757 (353 aa)
              0.554
DVU_0217
Tail protein, putative; Identified by similarity to GP-19483756 (158 aa)
              0.552
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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