STRINGSTRING
DVU_0245 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0245" - Protein phosphatase, putative in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0245Protein phosphatase, putative; Identified by match to protein family HMM PF00782 (369 aa)    
Predicted Functional Partners:
DVU_0246
Pyruvate phosphate dikinase, PEP/pyruvate binding domain protein; Identified by similarity to SP-O29548; match to protein family HMM PF00391; match to protein family HMM PF01326 (744 aa)
 
   
  0.908
DVU_0247
Response regulator; Identified by match to protein family HMM PF00072 (119 aa)
 
     
  0.870
DVU_0249
Uncharacterized protein; Identified by similarity to OMNI-NTL01NSC0089 (323 aa)
 
     
  0.865
DVU_0250
Uncharacterized protein; Identified by Glimmer2; putative (195 aa)
 
     
  0.861
DVU_0244
Uncharacterized protein; Identified by Glimmer2; putative (285 aa)
 
          0.796
DVU_0400
Uncharacterized protein; Identified by Glimmer2; putative (183 aa)
   
          0.749
DVU_2522
Uncharacterized protein; Identified by Glimmer2; putative (200 aa)
   
          0.746
rex
Redox-sensing transcriptional repressor Rex; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state (214 aa)
           
  0.727
DVU_0590
Uncharacterized protein; Identified by Glimmer2; putative (134 aa)
           
  0.727
DVU_0742
Uncharacterized protein; Identified by Glimmer2; putative (278 aa)
   
          0.717
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (19%) [HD]