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hypD protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"hypD" - Hydrogenase expression/formation protein in Desulfovibrio vulgaris Hildenborough
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
hypDHydrogenase expression/formation protein; Identified by similarity to SP-P24192; match to protein family HMM PF01924 (365 aa)    
Predicted Functional Partners:
hypE
Hydrogenase expression/formation protein HypE; Identified by similarity to SP-P42034; match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR02124 (341 aa)
 
  0.999
hypB
Hydrogenase accessory protein HypB; Identified by similarity to SP-P24190; match to protein family HMM PF01495; match to protein family HMM TIGR00073 (224 aa)
 
  0.997
hypC
Hydrogenase assembly chaperone hypC/hupF; Identified by similarity to GP-15430693; match to protein family HMM PF01455; match to protein family HMM TIGR00074 (83 aa)
 
 
  0.991
hypF
Carbamoyltransferase HypF; Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide (839 aa)
 
     
  0.912
hysA
Periplasmic [NiFeSe] hydrogenase, large subunit, selenocysteine-containing; Selenoprotein; identified by match to protein family HMM PF00374 (510 aa)
 
 
  0.886
hypA
Probable hydrogenase nickel incorporation protein HypA 2; Probably plays a role in a hydrogenase nickel cofactor insertion step (120 aa)
 
   
  0.881
hysB
Periplasmic [NiFeSe] hydrogenase, small subunit; Identified by similarity to SP-P13063; match to protein family HMM PF01058; match to protein family HMM TIGR00391; match to protein family HMM TIGR01409 (317 aa)
 
 
  0.872
hynA-1
Periplasmic [NiFe] hydrogenase, large subunit, isozyme 1; Identified by similarity to SP-P21852; match to protein family HMM PF00374; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family (566 aa)
 
 
  0.846
hynA-2
Periplasmic [NiFe] hydrogenase, large subunit, isozyme 2; Identified by similarity to SP-P21852; match to protein family HMM PF00374; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family (549 aa)
 
 
  0.845
hypA1
Probable hydrogenase nickel incorporation protein HypA 1; Probably plays a role in a hydrogenase nickel cofactor insertion step (117 aa)
 
   
  0.836
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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