Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0328Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534. (381 aa)    
Predicted Functional Partners:
DVU_0327
Exopolysaccharide biosynthesis protein, putative; Identified by match to protein family HMM PF02397.
  
 0.956
DVU_3176
Identified by similarity to SP:P39861; match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721.
  
 0.876
DVU_0281
Exopolysaccharide biosynthesis protein, putative; Identified by match to protein family HMM PF02397.
  
 0.829
DVU_0319
Identified by similarity to GP:20560072; match to protein family HMM PF01370.
 
  
 0.725
DVU_1061
Identified by similarity to SP:P71243; match to protein family HMM PF00534.
  
     0.678
DVU_3192
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.
  
     0.652
DVU_2842
Type II DNA modification methyltransferase, putative; Identified by similarity to SP:P11876; match to protein family HMM PF00145; match to protein family HMM TIGR00675.
      
 0.651
DVU_3131
Transcriptional regulator, putative; Identified by match to protein family HMM PF04198.
      
 0.651
DVU_1060
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.
  
     0.650
DVU_0561
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.
  
     0.643
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.