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DVU_0333 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0333" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0333Uncharacterized protein; Identified by Glimmer2; putative (218 aa)    
Predicted Functional Partners:
ddl
D-alanine--D-alanine ligase; Cell wall formation (303 aa)
              0.886
DVU_2224
Uncharacterized protein; Identified by Glimmer2; putative (216 aa)
 
          0.784
DVU_1039
annotation not available (213 aa)
   
          0.761
DVU_1683
Uncharacterized protein; Identified by Glimmer2; putative (578 aa)
   
          0.734
DVU_2223
Uncharacterized protein; Identified by Glimmer2; putative (114 aa)
   
          0.725
DVU_1875
DafA protein; Identified by similarity to SP-P77527 (105 aa)
   
        0.718
DVU_0335
3-deoxy-D-manno-octulosonic-acid transferase, putative; Identified by similarity to GP-17221411 (530 aa)
              0.708
DVU_2225
annotation not available (751 aa)
 
          0.706
DVU_1952
Uncharacterized protein; Identified by Glimmer2; putative (231 aa)
 
          0.698
DVU_1194
Uncharacterized protein; Identified by Glimmer2; putative (368 aa)
 
          0.697
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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