STRINGSTRING
DVU_0359 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0359" - annotation not available in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0359annotation not available (108 aa)    
Predicted Functional Partners:
DVU_0665
Nitrogen fixation protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (281 aa)
   
 
  0.902
DVU_0298
Uncharacterized protein; Identified by Glimmer2; putative (261 aa)
 
 
  0.771
DVU_3273
Uncharacterized protein; Identified by similarity to GP-944973 (130 aa)
   
          0.753
DVU_0772
Uncharacterized protein; Identified by Glimmer2; putative (115 aa)
   
          0.742
DVU_1460
Uncharacterized protein; Identified by Glimmer2; putative (111 aa)
   
          0.740
DVU_1022
SUF system FeS assembly ATPase SufC, putative; Identified by similarity to OMNI-NTL02MA4294; match to protein family HMM PF00005; match to protein family HMM TIGR01978 (258 aa)
   
 
  0.719
DVU_3274
Uncharacterized protein; Identified by Glimmer2; putative (222 aa)
   
          0.712
DVU_1621
Uncharacterized protein; Identified by Glimmer2; putative (140 aa)
   
          0.695
DVU_0651
annotation not available (362 aa)
   
          0.659
DVU_0691
annotation not available (319 aa)
   
          0.651
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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