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trxB-1 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"trxB-1" - Thioredoxin reductase in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
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Cooccurence
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[Homology]
Score
trxB-1Thioredoxin reductase; Identified by similarity to SP-P50971; match to protein family HMM PF00070; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family (305 aa)    
Predicted Functional Partners:
DVU_0378
Thioredoxin, putative; Identified by similarity to SP-P80579 (104 aa)
 
 
  0.927
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP (351 aa)
     
 
  0.904
DVU_0376
Uncharacterized protein; Identified by Glimmer2; putative (88 aa)
              0.846
trx
Thioredoxin; Identified by similarity to SP-P06544; match to protein family HMM PF00085; match to protein family HMM TIGR01068; Belongs to the thioredoxin family (107 aa)
 
 
  0.837
DVU_0375
Identified by match to protein family HMM PF00208 (409 aa)
         
  0.795
DVU_0379
Transcriptional regulator, putative; Identified by match to protein family HMM PF00027 (225 aa)
 
     
  0.786
DVU_2247
Antioxidant, AhpC/Tsa family; Identified by match to protein family HMM PF00578 (204 aa)
   
 
  0.738
nadK
NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2’-hydroxyl of the adenosine moiety of NAD to yield NADP (299 aa)
         
  0.708
rplE
50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs (179 aa)
   
        0.685
DVU_0883
Glutaredoxin, putative; Identified by match to protein family HMM PF00462 (85 aa)
   
 
  0.652
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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