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DVU_0400 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0400" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
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[Homology]
Score
DVU_0400Uncharacterized protein; Identified by Glimmer2; putative (183 aa)    
Predicted Functional Partners:
DVU_0401
Uncharacterized protein; Identified by Glimmer2; putative (183 aa)
 
          0.890
DVU_0399
Uncharacterized protein; Identified by Glimmer2; putative (262 aa)
 
          0.869
DVU_2522
Uncharacterized protein; Identified by Glimmer2; putative (200 aa)
 
          0.785
DVU_0742
Uncharacterized protein; Identified by Glimmer2; putative (278 aa)
   
          0.777
DVU_1006
Uncharacterized protein; Identified by Glimmer2; putative (149 aa)
   
          0.760
DVU_0245
Protein phosphatase, putative; Identified by match to protein family HMM PF00782 (369 aa)
   
          0.749
DVU_3112
TPR domain protein; Identified by match to protein family HMM PF00515 (267 aa)
   
          0.712
DVU_0263
Acidic cytochrome c3; Identified by similarity to SP-P94690 (126 aa)
   
          0.708
DVU_0584
Transposase, putative; Identified by similarity to OMNI-NTL01NM00438 (312 aa)
   
          0.701
DVU_3175
annotation not available (67 aa)
   
          0.697
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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