STRINGSTRING
DVU_0401 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0401" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0401Uncharacterized protein; Identified by Glimmer2; putative (183 aa)    
Predicted Functional Partners:
DVU_0399
Uncharacterized protein; Identified by Glimmer2; putative (262 aa)
 
          0.910
DVU_0400
Uncharacterized protein; Identified by Glimmer2; putative (183 aa)
 
          0.890
DVU_3359
Uncharacterized protein; Identified by Glimmer2; putative (139 aa)
   
          0.784
DVU_1604
Uncharacterized protein; Identified by Glimmer2; putative (192 aa)
   
          0.784
DVU_3281
Uncharacterized protein; Identified by Glimmer2; putative (166 aa)
   
          0.783
DVU_1845
Uncharacterized protein; Identified by Glimmer2; putative (90 aa)
   
          0.782
DVU_1251
Uncharacterized protein; Identified by Glimmer2; putative (72 aa)
   
          0.781
DVU_1980
Uncharacterized protein; Identified by Glimmer2; putative (130 aa)
   
          0.780
DVU_1032
Uncharacterized protein; Identified by Glimmer2; putative (169 aa)
   
          0.780
DVU_0524
Uncharacterized protein; Identified by Glimmer2; putative (138 aa)
   
          0.775
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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