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speA protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"speA" - Arginine decarboxylase in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
speAArginine decarboxylase; Identified by similarity to OMNI-NTL01TE1806; match to protein family HMM PF00278; match to protein family HMM PF02784; match to protein family HMM TIGR01273 (659 aa)    
Predicted Functional Partners:
DVU_0421
Agmatinase, putative; Identified by similarity to OMNI-NTL01SS00132; match to protein family HMM PF00491; match to protein family HMM TIGR01230; Belongs to the arginase family (290 aa)
 
  0.995
argH
Argininosuccinate lyase; Identified by similarity to SP-O34858; match to protein family HMM PF00206; match to protein family HMM TIGR00838; Belongs to the lyase 1 family. Argininosuccinate lyase subfamily (460 aa)
     
 
  0.837
lys1
Saccharopine dehydrogenase; Identified by match to protein family HMM PF03435 (396 aa)
 
     
  0.693
nspC
Carboxynorspermidine/carboxyspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily (390 aa)
 
     
  0.600
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA (87 aa)
       
      0.538
rpmH
50S ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family (44 aa)
       
      0.538
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family (1006 aa)
           
  0.530
DVU_2897
MEMO1 family protein DVU_2897; Identified by similarity to SP-O67039; match to protein family HMM PF01875; Belongs to the MEMO1 family (329 aa)
       
      0.443
secA
Protein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family (833 aa)
       
 
  0.438
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
              0.400
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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