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lys1 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"lys1" - Saccharopine dehydrogenase in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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lys1Saccharopine dehydrogenase; Identified by match to protein family HMM PF03435 (396 aa)    
Predicted Functional Partners:
nspC
Carboxynorspermidine/carboxyspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily (390 aa)
 
     
  0.923
lysA-2
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (421 aa)
       
  0.919
lysA-1
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (412 aa)
       
  0.919
speA
Arginine decarboxylase; Identified by similarity to OMNI-NTL01TE1806; match to protein family HMM PF00278; match to protein family HMM PF02784; match to protein family HMM TIGR01273 (659 aa)
 
     
  0.693
argG
Argininosuccinate synthase; Identified by similarity to GP-20150951; match to protein family HMM PF00764; match to protein family HMM TIGR00032; Belongs to the argininosuccinate synthase family. Type 1 subfamily (396 aa)
     
   
  0.519
DVU_1064
Aconitate hydratase, putative; Identified by match to protein family HMM PF00330; match to protein family HMM PF00694; match to protein family HMM TIGR01342 (642 aa)
     
   
  0.505
DVU_0421
Agmatinase, putative; Identified by similarity to OMNI-NTL01SS00132; match to protein family HMM PF00491; match to protein family HMM TIGR01230; Belongs to the arginase family (290 aa)
   
   
  0.486
hisG
ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N’-(5’-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity; Belongs to the ATP phosphoribosyltransferase family. Long subfamily (293 aa)
     
        0.459
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (377 aa)
              0.457
argH
Argininosuccinate lyase; Identified by similarity to SP-O34858; match to protein family HMM PF00206; match to protein family HMM TIGR00838; Belongs to the lyase 1 family. Argininosuccinate lyase subfamily (460 aa)
     
   
  0.443
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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