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gmd protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"gmd" - GDP-mannose 4,6-dehydratase in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
gmdGDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. GDP-mannose 4,6-dehydratase subfamily (381 aa)    
Predicted Functional Partners:
wcaG
GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction (323 aa)
  0.999
DVU_0697
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Identified by match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM TIGR01479; Belongs to the mannose-6-phosphate isomerase type 2 family (472 aa)
 
  0.992
ugd
UDP-glucose 6-dehydrogenase; Identified by similarity to SP-O54068; match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721 (445 aa)
   
 
  0.674
DVU_0632
Identified by match to protein family HMM PF00190 (205 aa)
   
 
  0.629
DVU_0685
Phosphomannomutase; Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880 (453 aa)
   
   
  0.622
DVU_0134
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535 (345 aa)
         
  0.621
DVU_3140
Capsular polysaccharide transport protein, putative; Identified by similarity to GP-2801417; match to protein family HMM PF02563 (537 aa)
   
   
  0.619
rfbD
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family (291 aa)
         
  0.590
DVU_0073
CDP-glucose-4,6-dehydratase, putative; Identified by similarity to GP-1197641 (368 aa)
   
 
0.589
DVU_2455
Identified by match to protein family HMM PF01370 (316 aa)
   
 
0.589
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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