STRINGSTRING
DVU_0456 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0456" - annotation not available in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0456annotation not available (335 aa)    
Predicted Functional Partners:
DVU_0455
Uncharacterized protein; Identified by Glimmer2; putative (255 aa)
              0.838
DVU_0493
Uncharacterized protein; Identified by Glimmer2; putative (102 aa)
 
          0.675
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
   
   
  0.670
DVU_0454
Uncharacterized protein; Identified by Glimmer2; putative (82 aa)
              0.572
DVU_1039
annotation not available (213 aa)
   
          0.522
DVU_2224
Uncharacterized protein; Identified by Glimmer2; putative (216 aa)
 
          0.518
DVU_2225
annotation not available (751 aa)
 
          0.498
DVU_1460
Uncharacterized protein; Identified by Glimmer2; putative (111 aa)
   
          0.497
DVU_2436
Uncharacterized protein; Identified by similarity to OMNI-AF1432 (210 aa)
   
          0.486
DVU_0991
Uncharacterized protein; Identified by similarity to OMNI-NTL01MM1967 (272 aa)
   
          0.440
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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