STRINGSTRING
DVU_0475 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0475" - annotation not available in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0475annotation not available (146 aa)    
Predicted Functional Partners:
DVU_0476
Uncharacterized protein; Identified by Glimmer2; putative (71 aa)
              0.629
DVU_2165
Lysozyme, putative; Identified by match to protein family HMM PF01464 (166 aa)
   
          0.607
AAS94957.1
Identified by similarity to OMNI-SO3543; match to protein family HMM PF00665 (349 aa)
              0.566
DVU_0473
Uncharacterized protein; Identified by Glimmer2; putative (42 aa)
              0.503
DVU_0472
Uncharacterized protein; Identified by Glimmer2; putative (133 aa)
              0.494
DVU_0351
Identified by similarity to SP-P39627; similar to GP-4741793 (544 aa)
              0.435
DVU_0040
Uncharacterized protein; Identified by Glimmer2; putative (204 aa)
   
          0.428
DVU_0134
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535 (345 aa)
              0.414
icd
Isocitrate dehydrogenase, NADP-dependent; Identified by match to protein family HMM PF00180; match to protein family HMM TIGR00183 (380 aa)
              0.408
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (25%) [HD]