icd protein (Desulfovibrio vulgaris Hildenborough)

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Score

icd

Isocitrate dehydrogenase, NADP-dependent; Identified by match to protein family HMM PF00180; match to protein family HMM TIGR00183. (380 aa)

Predicted Functional Partners:

ldh

0.983

sucCD

0.983

DVU_1064

0.963

DVU_3350

0.955

porA

0.920

DVU_3349

0.913

DVU_1944

0.910

DVU_1947

0.910

DVU_1945

0.908

porB

0.907

Your Current Organism:

Desulfovibrio vulgaris Hildenborough

NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DVU_1064	DVU_1947	DVU_1064	DVU_1947	Aconitate hydratase, putative; Identified by match to protein family HMM PF00330; match to protein family HMM PF00694; match to protein family HMM TIGR01342.	Pyruvate ferredoxin oxidoreductase, gamma subunit, putative; Identified by match to protein family HMM PF01558.	0.409
DVU_1064	icd	DVU_1064	DVU_0477	Aconitate hydratase, putative; Identified by match to protein family HMM PF00330; match to protein family HMM PF00694; match to protein family HMM TIGR01342.	Isocitrate dehydrogenase, NADP-dependent; Identified by match to protein family HMM PF00180; match to protein family HMM TIGR00183.	0.963
DVU_1064	ldh	DVU_1064	DVU_0600	Aconitate hydratase, putative; Identified by match to protein family HMM PF00330; match to protein family HMM PF00694; match to protein family HMM TIGR01342.	L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.	0.937
DVU_1064	porA	DVU_1064	DVU_1569	Aconitate hydratase, putative; Identified by match to protein family HMM PF00330; match to protein family HMM PF00694; match to protein family HMM TIGR01342.	Pyruvate ferredoxin oxidoreductase, alpha subunit; Identified by similarity to GP:43498; match to protein family HMM PF01558; match to protein family HMM PF01855.	0.411
DVU_1064	sucCD	DVU_1064	DVU_2137	Aconitate hydratase, putative; Identified by match to protein family HMM PF00330; match to protein family HMM PF00694; match to protein family HMM TIGR01342.	succinyl-CoA synthase, beta/alpha subunits; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.	0.965
DVU_1944	DVU_1945	DVU_1944	DVU_1945	Pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative; Identified by match to protein family HMM PF00037.	Pyruvate ferredoxin oxidoreductase, alpha subunit, putative; Identified by match to protein family HMM PF01855.	0.999
DVU_1944	DVU_1947	DVU_1944	DVU_1947	Pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative; Identified by match to protein family HMM PF00037.	Pyruvate ferredoxin oxidoreductase, gamma subunit, putative; Identified by match to protein family HMM PF01558.	0.999
DVU_1944	DVU_3349	DVU_1944	DVU_3349	Pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative; Identified by match to protein family HMM PF00037.	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain protein; Identified by match to protein family HMM PF01855.	0.988
DVU_1944	DVU_3350	DVU_1944	DVU_3350	Pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative; Identified by match to protein family HMM PF00037.	Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037.	0.905
DVU_1944	icd	DVU_1944	DVU_0477	Pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative; Identified by match to protein family HMM PF00037.	Isocitrate dehydrogenase, NADP-dependent; Identified by match to protein family HMM PF00180; match to protein family HMM TIGR00183.	0.910
DVU_1944	ldh	DVU_1944	DVU_0600	Pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative; Identified by match to protein family HMM PF00037.	L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.	0.964
DVU_1944	porA	DVU_1944	DVU_1569	Pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative; Identified by match to protein family HMM PF00037.	Pyruvate ferredoxin oxidoreductase, alpha subunit; Identified by similarity to GP:43498; match to protein family HMM PF01558; match to protein family HMM PF01855.	0.996
DVU_1944	porB	DVU_1944	DVU_1570	Pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative; Identified by match to protein family HMM PF00037.	Pyruvate ferredoxin oxidoreductase, beta subunit; Identified by similarity to GP:1565184.	0.987
DVU_1944	sucCD	DVU_1944	DVU_2137	Pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative; Identified by match to protein family HMM PF00037.	succinyl-CoA synthase, beta/alpha subunits; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.	0.967
DVU_1945	DVU_1944	DVU_1945	DVU_1944	Pyruvate ferredoxin oxidoreductase, alpha subunit, putative; Identified by match to protein family HMM PF01855.	Pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative; Identified by match to protein family HMM PF00037.	0.999
DVU_1945	DVU_1947	DVU_1945	DVU_1947	Pyruvate ferredoxin oxidoreductase, alpha subunit, putative; Identified by match to protein family HMM PF01855.	Pyruvate ferredoxin oxidoreductase, gamma subunit, putative; Identified by match to protein family HMM PF01558.	0.999
DVU_1945	DVU_3349	DVU_1945	DVU_3349	Pyruvate ferredoxin oxidoreductase, alpha subunit, putative; Identified by match to protein family HMM PF01855.	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain protein; Identified by match to protein family HMM PF01855.	0.917
DVU_1945	DVU_3350	DVU_1945	DVU_3350	Pyruvate ferredoxin oxidoreductase, alpha subunit, putative; Identified by match to protein family HMM PF01855.	Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037.	0.918
DVU_1945	icd	DVU_1945	DVU_0477	Pyruvate ferredoxin oxidoreductase, alpha subunit, putative; Identified by match to protein family HMM PF01855.	Isocitrate dehydrogenase, NADP-dependent; Identified by match to protein family HMM PF00180; match to protein family HMM TIGR00183.	0.908
DVU_1945	ldh	DVU_1945	DVU_0600	Pyruvate ferredoxin oxidoreductase, alpha subunit, putative; Identified by match to protein family HMM PF01855.	L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.	0.985

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