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DVU_0507 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0507" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Experiments
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Textmining
[Homology]
Score
DVU_0507Uncharacterized protein; Identified by similarity to OMNI-NTL01BH2415; match to protein family HMM PF04456 (96 aa)    
Predicted Functional Partners:
DVU_0506
DHH family protein; Identified by match to protein family HMM PF01368; match to protein family HMM PF02272 (333 aa)
              0.858
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (304 aa)
              0.858
rpsO
30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA (89 aa)
              0.810
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (1079 aa)
              0.689
nusA
Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination (428 aa)
              0.680
DVU_0509
Uncharacterized protein; Identified by similarity to GP-642365 (76 aa)
              0.679
rimP
Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits (172 aa)
              0.613
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (760 aa)
              0.580
DVU_0566
GAF domain protein; Identified by match to protein family HMM PF01590 (185 aa)
   
          0.536
DVU_3273
Uncharacterized protein; Identified by similarity to GP-944973 (130 aa)
   
          0.492
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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