Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0519Flagellar hook-associated protein FlgK, putative; Identified by similarity to SP:P33235; match to protein family HMM PF00460; Belongs to the flagella basal body rod proteins family. (698 aa)    
Predicted Functional Partners:
DVU_0520
Flagellar hook-associated protein FlgL, putative; Identified by match to protein family HMM PF00669; match to protein family HMM PF02012.
 
 
 0.999
DVU_0863
Flagellar hook-associated protein 2, putative; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
 
 0.997
DVU_0514
Identified by match to protein family HMM PF03240.
 
  
 0.994
flgH
Flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.993
flgG
Flagellar basal-body rod protein FlgG; Identified by similarity to SP:P16439; match to protein family HMM PF00460; Belongs to the flagella basal body rod proteins family.
 
  
 0.992
fliN
Flagellar motor switch protein FliN; Identified by similarity to SP:P15070; match to protein family HMM PF01052.
 
 
 0.991
DVU_0862
Flagellar protein FliS/hypothetical protein, fusion; Identified by similarity to SP:P26608; match to protein family HMM PF02561; match to protein family HMM TIGR00208.
 
 
 0.990
flgI
Flagellar P-ring protein FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.988
DVU_0517
Peptidase, M23/M37 family; Identified by similarity to SP:P75942; match to protein family HMM PF01551.
  
  
 0.987
flgC
Flagellar basal-body rod protein FlgC; Identified by similarity to SP:P75935; match to protein family HMM PF00460; match to protein family HMM TIGR01395; Belongs to the flagella basal body rod proteins family.
 
  
 0.986
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.