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DVU_0543 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0543" - annotation not available in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0543annotation not available (369 aa)    
Predicted Functional Partners:
DVU_0544
Uncharacterized protein; Identified by Glimmer2; putative (133 aa)
              0.788
DVU_0545
Uncharacterized protein; Identified by similarity to OMNI-NTL01MT00980; match to protein family HMM PF00582 (141 aa)
              0.786
DVU_0542
Universal stress protein family; Identified by similarity to OMNI-NTL02MA3200; match to protein family HMM PF00582; Belongs to the universal stress protein A family (140 aa)
              0.783
DVU_0541
annotation not available (41 aa)
              0.778
DVU_0540
Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518 (803 aa)
 
          0.586
DVU_0539
Sigma-54 dependent DNA-binding response regulator; Identified by similarity to SP-P21712; match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM TIGR01199 (467 aa)
              0.510
DVU_0149
Probable membrane transporter protein; Identified by similarity to OMNI-NTL01HSA00048; match to protein family HMM PF01925 (350 aa)
 
     
  0.429
DVU_0133
Uncharacterized protein; Identified by Glimmer2; putative (240 aa)
   
          0.429
DVU_3299
Probable membrane transporter protein; Identified by match to protein family HMM PF01925 (356 aa)
 
     
  0.413
DVU_0132
Probable membrane transporter protein; Identified by similarity to OMNI-NTL01HSA00048; match to protein family HMM PF01925 (374 aa)
 
     
  0.404
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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