STRINGSTRING
DVU_0545 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0545" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0545Uncharacterized protein; Identified by similarity to OMNI-NTL01MT00980; match to protein family HMM PF00582 (141 aa)    
Predicted Functional Partners:
DVU_0544
Uncharacterized protein; Identified by Glimmer2; putative (133 aa)
              0.852
DVU_0543
annotation not available (369 aa)
              0.786
DVU_0542
Universal stress protein family; Identified by similarity to OMNI-NTL02MA3200; match to protein family HMM PF00582; Belongs to the universal stress protein A family (140 aa)
              0.720
DVU_0541
annotation not available (41 aa)
              0.714
groEL
60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (547 aa)
     
 
  0.511
DVU_0540
Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518 (803 aa)
              0.476
DVU_0539
Sigma-54 dependent DNA-binding response regulator; Identified by similarity to SP-P21712; match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM TIGR01199 (467 aa)
              0.472
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (15%) [HD]