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DVU_0554 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0554" - Identified by match to protein family HMM PF01370 in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
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Cooccurence
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[Homology]
Score
DVU_0554Identified by match to protein family HMM PF01370 (312 aa)    
Predicted Functional Partners:
DVU_0555
Uncharacterized protein; Identified by Glimmer2; putative (84 aa)
              0.710
DVU_0556
ISDvu3, transposase OrfA; Identified by similarity to GP-14286345; match to protein family HMM PF01527 (87 aa)
              0.635
DVU_0553
Uncharacterized protein; Identified by Glimmer2; putative (83 aa)
              0.629
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. GDP-mannose 4,6-dehydratase subfamily (381 aa)
   
 
  0.521
DVU_0506
DHH family protein; Identified by match to protein family HMM PF01368; match to protein family HMM PF02272 (333 aa)
   
 
      0.479
metK
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (391 aa)
     
 
  0.468
DVU_0134
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535 (345 aa)
 
 
  0.439
galE
UDP-glucose 4-epimerase; Identified by match to protein family HMM PF01370; match to protein family HMM TIGR01179; Belongs to the NAD(P)-dependent epimerase/dehydratase family (331 aa)
 
 
0.427
DVU_3007
Uncharacterized protein; Identified by Glimmer2; putative (407 aa)
       
      0.408
trx
Thioredoxin; Identified by similarity to SP-P06544; match to protein family HMM PF00085; match to protein family HMM TIGR01068; Belongs to the thioredoxin family (107 aa)
       
      0.408
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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