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DVU_0567 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0567" - Identified by match to protein family HMM PF03741 in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
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Experiments
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Textmining
[Homology]
Score
DVU_0567Identified by match to protein family HMM PF03741 (359 aa)    
Predicted Functional Partners:
DVU_0079
ZIP zinc transporter family protein; Identified by similarity to SP-Q06916; match to protein family HMM PF02535 (267 aa)
         
  0.711
DVU_0525
Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047 (222 aa)
         
  0.706
DVU_0949
Conserved domain protein; Identified by similarity to OMNI-NMB1475 (253 aa)
           
  0.700
DVU_0099
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (386 aa)
           
  0.700
DVU_0102
Cation ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF01297 (330 aa)
           
  0.584
DVU_0568
tRNA 2-selenouridine synthase; Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA (346 aa)
              0.559
DVU_0100
TonB-dependent receptor; Identified by match to protein family HMM PF00593 (649 aa)
           
  0.509
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
         
  0.504
gap-1
Glyceraldehyde-3-phosphate dehydrogenase; Identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (338 aa)
              0.473
DVU_0566
GAF domain protein; Identified by match to protein family HMM PF01590 (185 aa)
              0.459
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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