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DVU_0590 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0590" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0590Uncharacterized protein; Identified by Glimmer2; putative (134 aa)    
Predicted Functional Partners:
DVU_0250
Uncharacterized protein; Identified by Glimmer2; putative (195 aa)
           
  0.727
DVU_0247
Response regulator; Identified by match to protein family HMM PF00072 (119 aa)
           
  0.727
DVU_0246
Pyruvate phosphate dikinase, PEP/pyruvate binding domain protein; Identified by similarity to SP-O29548; match to protein family HMM PF00391; match to protein family HMM PF01326 (744 aa)
           
  0.727
DVU_0245
Protein phosphatase, putative; Identified by match to protein family HMM PF00782 (369 aa)
           
  0.727
DVU_0251
Probable membrane transporter protein; Identified by similarity to OMNI-AF2125; match to protein family HMM PF01925 (320 aa)
           
  0.539
DVU_0591
Methyl-accepting chemotaxis protein; Identified by similarity to SP-P02942; match to protein family HMM PF00015; match to protein family HMM PF00672 (652 aa)
              0.479
cheW-1
Chemotaxis protein CheW; Identified by similarity to SP-P07365; match to protein family HMM PF01584 (173 aa)
              0.405
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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