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DVU_0611 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0611" - ABC transporter, ATP-binding protein in Desulfovibrio vulgaris Hildenborough
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
DVU_0611ABC transporter, ATP-binding protein; Identified by similarity to GP-21109946; match to protein family HMM PF00005 (275 aa)    
Predicted Functional Partners:
DVU_0612
STAS domain protein; Identified by similarity to GP-9106294; match to protein family HMM PF01740; match to protein family HMM PF02405; match to protein family HMM TIGR00056 (406 aa)
 
  0.997
DVU_0610
Uncharacterized protein; Identified by similarity to OMNI-NTL03PA03213; match to protein family HMM PF02470 (306 aa)
  0.992
DVU_1246
Membrane protein, putative; Identified by similarity to OMNI-NTL01AA00252; match to protein family HMM PF02405; match to protein family HMM TIGR00056 (267 aa)
 
  0.965
DVU_0609
Lipoprotein, putative; Identified by similarity to OMNI-NTL01SM01830 (211 aa)
 
   
  0.907
DVU_1244
Uncharacterized protein; Identified by similarity to OMNI-NTL01RS2960; match to protein family HMM PF02470 (148 aa)
 
  0.893
DVU_1243
Uncharacterized protein; Identified by similarity to GP-22799047 (210 aa)
   
 
  0.846
DVU_1245
ABC transporter, ATP-binding protein; Identified by similarity to SP-P45393; match to protein family HMM PF00005 (274 aa)
 
   
 
0.821
DVU_0613
Uncharacterized protein; Identified by Glimmer2; putative (32 aa)
              0.482
DVU_0608
Methyl-accepting chemotaxis protein; Identified by similarity to SP-P39214; match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743 (677 aa)
              0.468
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
   
   
  0.464
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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