STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0638Membrane protein, putative; Identified by similarity to OMNI:CT0045. (288 aa)    
Predicted Functional Partners:
DVU_0691
Membrane protein, putative.
  
     0.761
DVU_0651
Membrane protein, putative.
  
     0.679
DVU_1073
Conserved domain protein; Identified by similarity to OMNI:NT01MC2073.
  
     0.665
DVU_2225
acetyl-CoA carboxylase, carboxyl transferase, alpha/beta subunit.
  
    0.637
DVU_3227
Flagellar basal body-associated protein, putative; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
    0.611
DVU_1339
Lipoprotein, putative.
  
     0.610
DVU_0821
Conserved hypothetical protein; Identified by similarity to OMNI:NT01MC2073.
  
    0.601
DVU_1338
Conserved hypothetical protein; Identified by similarity to OMNI:SO3257.
  
     0.588
DVU_2485
Membrane protein, putative.
  
    0.565
DVU_2522
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.563
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.