STRINGSTRING
DVU_0641 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0641" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0641Uncharacterized protein; Identified by similarity to OMNI-TM0735 (382 aa)    
Predicted Functional Partners:
pomA
Chemotaxis protein PomA; Identified by similarity to SP-O06873; match to protein family HMM PF01618 (250 aa)
              0.857
pomB
Chemotaxis protein PomB; Identified by similarity to GP-2130949; match to protein family HMM PF00691 (257 aa)
              0.855
fliW
Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum; Belongs to the FliW family (173 aa)
 
          0.573
DVU_1407
Radical SAM domain protein; Identified by match to protein family HMM PF04055 (491 aa)
   
          0.457
DVU_0784
Uncharacterized protein; Identified by similarity to OMNI-NTL01TT0780; match to protein family HMM PF04519 (115 aa)
   
          0.429
DVU_1445
Flagellar hook-length control domain protein; Identified by match to protein family HMM PF02120 (531 aa)
 
        0.421
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (17%) [HD]