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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
cheV-2Chemotaxis protein CheV; Identified by similarity to SP:P37599; match to protein family HMM PF00072; match to protein family HMM PF01584. (316 aa)    
Predicted Functional Partners:
DVU_0449
Sensor/response regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 
 0.997
cheA-3
Chemotaxis protein CheA; Identified by similarity to SP:P29072; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895.
 
 0.997
cheA-2
Chemotaxis protein CheA; Identified by similarity to SP:P07363; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895.
 0.996
cheA-1
Chemotaxis protein CheA; Identified by similarity to SP:P07363; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895.
 0.995
DVU_1431
Hpt domain protein/STAS domain protein; Identified by match to protein family HMM PF01627; match to protein family HMM PF01740.
  
 
 0.983
cheV-1
Chemotaxis protein CheV; Identified by similarity to SP:P37599; match to protein family HMM PF00072; match to protein family HMM PF01584.
 
0.982
cheV-3
Chemotaxis protein CheV; Identified by similarity to SP:P37599; match to protein family HMM PF00072; match to protein family HMM PF01584.
 
0.982
DVU_1869
Methyl-accepting chemotaxis protein; Identified by similarity to SP:P39216; match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; match to protein family HMM TIGR00229.
 
 0.961
DVU_2738
Methyl-accepting chemotaxis protein; Identified by similarity to SP:P39214; match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM TIGR00229.
 
 0.955
DVU_0018
Methyl-accepting chemotaxis protein, putative; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672.
 
 0.944
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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