DVU_0670 protein (Desulfovibrio vulgaris Hildenborough)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

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Your Current Organism:

Desulfovibrio vulgaris Hildenborough

NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DVU_0117	DVU_0670	DVU_0117	DVU_0670	Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.	Exopolysaccharide production protein, putative; Identified by match to protein family HMM PF04932.	0.696
DVU_0117	DVU_1892	DVU_0117	DVU_1892	Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.	Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.	0.652
DVU_0117	DVU_2993	DVU_0117	DVU_2993	Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.	Glycosyl transferase, group 1/2 family protein; Identified by match to protein family HMM PF00534; match to protein family HMM PF00535.	0.471
DVU_0117	DVU_3106	DVU_0117	DVU_3106	Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.	GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.577
DVU_0346	DVU_0670	DVU_0346	DVU_0670	Membrane protein, putative.	Exopolysaccharide production protein, putative; Identified by match to protein family HMM PF04932.	0.720
DVU_0346	DVU_0697	DVU_0346	DVU_0697	Membrane protein, putative.	Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Identified by match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM TIGR01479; Belongs to the mannose-6-phosphate isomerase type 2 family.	0.438
DVU_0346	DVU_2993	DVU_0346	DVU_2993	Membrane protein, putative.	Glycosyl transferase, group 1/2 family protein; Identified by match to protein family HMM PF00534; match to protein family HMM PF00535.	0.677
DVU_0346	DVU_3140	DVU_0346	DVU_3140	Membrane protein, putative.	Capsular polysaccharide transport protein, putative; Identified by similarity to GP:2801417; match to protein family HMM PF02563.	0.471
DVU_0346	rny	DVU_0346	DVU_2671	Membrane protein, putative.	HDIG/HD/KH domain protein; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.	0.404
DVU_0669	DVU_0670	DVU_0669	DVU_0670	Hypothetical protein; Identified by Glimmer2; putative.	Exopolysaccharide production protein, putative; Identified by match to protein family HMM PF04932.	0.731
DVU_0670	DVU_0117	DVU_0670	DVU_0117	Exopolysaccharide production protein, putative; Identified by match to protein family HMM PF04932.	Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.	0.696
DVU_0670	DVU_0346	DVU_0670	DVU_0346	Exopolysaccharide production protein, putative; Identified by match to protein family HMM PF04932.	Membrane protein, putative.	0.720
DVU_0670	DVU_0669	DVU_0670	DVU_0669	Exopolysaccharide production protein, putative; Identified by match to protein family HMM PF04932.	Hypothetical protein; Identified by Glimmer2; putative.	0.731
DVU_0670	DVU_0697	DVU_0670	DVU_0697	Exopolysaccharide production protein, putative; Identified by match to protein family HMM PF04932.	Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Identified by match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM TIGR01479; Belongs to the mannose-6-phosphate isomerase type 2 family.	0.733
DVU_0670	DVU_1892	DVU_0670	DVU_1892	Exopolysaccharide production protein, putative; Identified by match to protein family HMM PF04932.	Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.	0.696
DVU_0670	DVU_2993	DVU_0670	DVU_2993	Exopolysaccharide production protein, putative; Identified by match to protein family HMM PF04932.	Glycosyl transferase, group 1/2 family protein; Identified by match to protein family HMM PF00534; match to protein family HMM PF00535.	0.473
DVU_0670	DVU_3013	DVU_0670	DVU_3013	Exopolysaccharide production protein, putative; Identified by match to protein family HMM PF04932.	Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.	0.503
DVU_0670	DVU_3106	DVU_0670	DVU_3106	Exopolysaccharide production protein, putative; Identified by match to protein family HMM PF04932.	GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.597
DVU_0670	DVU_3140	DVU_0670	DVU_3140	Exopolysaccharide production protein, putative; Identified by match to protein family HMM PF04932.	Capsular polysaccharide transport protein, putative; Identified by similarity to GP:2801417; match to protein family HMM PF02563.	0.585
DVU_0670	rny	DVU_0670	DVU_2671	Exopolysaccharide production protein, putative; Identified by match to protein family HMM PF04932.	HDIG/HD/KH domain protein; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.	0.765

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