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DVU_0688 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0688" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0688Uncharacterized protein; Identified by Glimmer2; putative (166 aa)    
Predicted Functional Partners:
DVU_0687
Aldehyde-ferredoxin oxidoreductase, tungsten-containing, putative; Identified by similarity to SP-Q51739; match to protein family HMM PF01314; match to protein family HMM PF02730 (594 aa)
              0.845
DVU_0686
Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037 (162 aa)
              0.845
rnhA
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (156 aa)
              0.837
DVU_0685
Phosphomannomutase; Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880 (453 aa)
              0.600
DVU_0684
Protein HflK; HflC and HflK could encode or regulate a protease (378 aa)
              0.450
DVU_0683
Protein HflC; HflC and HflK could regulate a protease (283 aa)
              0.450
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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