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rnhA protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"rnhA" - Ribonuclease H in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rnhARibonuclease H; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (156 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
 
 
  0.869
DVU_0687
Aldehyde-ferredoxin oxidoreductase, tungsten-containing, putative; Identified by similarity to SP-Q51739; match to protein family HMM PF01314; match to protein family HMM PF02730 (594 aa)
              0.838
DVU_0686
Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037 (162 aa)
              0.838
DVU_0688
Uncharacterized protein; Identified by Glimmer2; putative (166 aa)
              0.837
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline (265 aa)
            0.794
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family (251 aa)
           
  0.776
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids; Belongs to the RNase HII family (220 aa)
   
 
  0.763
dnaX
DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity (616 aa)
 
      0.761
hemL
Glutamate-1-semialdehyde 2,1-aminomutase; Identified by similarity to SP-P30949; match to protein family HMM PF00202; match to protein family HMM TIGR00713; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily (423 aa)
            0.751
DVU_0685
Phosphomannomutase; Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880 (453 aa)
              0.703
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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