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DVU_0702 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0702" - Cytochrome c family protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0702Cytochrome c family protein; Identified by similarity to SP-Q57142 (148 aa)    
Predicted Functional Partners:
DVU_0399
Uncharacterized protein; Identified by Glimmer2; putative (262 aa)
   
          0.758
DVU_1604
Uncharacterized protein; Identified by Glimmer2; putative (192 aa)
   
          0.749
DVU_1251
Uncharacterized protein; Identified by Glimmer2; putative (72 aa)
   
          0.735
DVU_3359
Uncharacterized protein; Identified by Glimmer2; putative (139 aa)
   
          0.734
DVU_1845
Uncharacterized protein; Identified by Glimmer2; putative (90 aa)
   
          0.732
DVU_0524
Uncharacterized protein; Identified by Glimmer2; putative (138 aa)
   
          0.730
DVU_0401
Uncharacterized protein; Identified by Glimmer2; putative (183 aa)
   
          0.724
DVU_0410
Uncharacterized protein; Identified by Glimmer2; putative (201 aa)
   
          0.720
DVU_0756
TPR domain protein; Identified by match to protein family HMM PF00515 (237 aa)
   
          0.719
DVU_3225
Uncharacterized protein; Identified by Glimmer2; putative (140 aa)
   
          0.715
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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