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dctM protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"dctM" - TRAP transporter, DctM subunit in Desulfovibrio vulgaris Hildenborough
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctMTRAP transporter, DctM subunit; Identified by match to protein family HMM PF00597; match to protein family HMM TIGR00786 (427 aa)    
Predicted Functional Partners:
DVU_0706
TRAP transporter, DctQ subunit; Identified by match to protein family HMM PF04290 (156 aa)
   
  0.976
dctP
TRAP transporter solute receptor DctP; Identified by similarity to SP-P37735; match to protein family HMM PF03480; match to protein family HMM TIGR00787 (338 aa)
   
  0.954
DVU_0011
TRAP transporter solute receptor DctP; Identified by similarity to SP-P37735; match to protein family HMM PF03480; match to protein family HMM TIGR00787 (341 aa)
   
  0.838
DVU_2822
TRAP transporter solute receptor DctP; Identified by similarity to SP-P37735; match to protein family HMM PF03480; match to protein family HMM TIGR00787 (336 aa)
   
  0.829
DVU_0010
TRAP transporter, DctQ subunit; Identified by match to protein family HMM PF04290 (188 aa)
 
   
  0.813
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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