DVU_0710 protein (Desulfovibrio vulgaris Hildenborough)

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Your Current Organism:

Desulfovibrio vulgaris Hildenborough

NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DVU_0512	DVU_0517	DVU_0512	DVU_0517	Flagellar basal-body rod protein, putative; Identified by similarity to SP:P75939; match to protein family HMM PF00460; Belongs to the flagella basal body rod proteins family.	Peptidase, M23/M37 family; Identified by similarity to SP:P75942; match to protein family HMM PF01551.	0.948
DVU_0512	DVU_0710	DVU_0512	DVU_0710	Flagellar basal-body rod protein, putative; Identified by similarity to SP:P75939; match to protein family HMM PF00460; Belongs to the flagella basal body rod proteins family.	Competence protein comM, putative; Identified by similarity to SP:P45049; match to protein family HMM PF01078; match to protein family HMM TIGR00368.	0.581
DVU_0512	DVU_2069	DVU_0512	DVU_2069	Flagellar basal-body rod protein, putative; Identified by similarity to SP:P75939; match to protein family HMM PF00460; Belongs to the flagella basal body rod proteins family.	DNA processing protein DprA, putative; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	0.444
DVU_0512	def	DVU_0512	DVU_3366	Flagellar basal-body rod protein, putative; Identified by similarity to SP:P75939; match to protein family HMM PF00460; Belongs to the flagella basal body rod proteins family.	Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	0.436
DVU_0517	DVU_0512	DVU_0517	DVU_0512	Peptidase, M23/M37 family; Identified by similarity to SP:P75942; match to protein family HMM PF01551.	Flagellar basal-body rod protein, putative; Identified by similarity to SP:P75939; match to protein family HMM PF00460; Belongs to the flagella basal body rod proteins family.	0.948
DVU_0517	DVU_0710	DVU_0517	DVU_0710	Peptidase, M23/M37 family; Identified by similarity to SP:P75942; match to protein family HMM PF01551.	Competence protein comM, putative; Identified by similarity to SP:P45049; match to protein family HMM PF01078; match to protein family HMM TIGR00368.	0.433
DVU_0517	DVU_2069	DVU_0517	DVU_2069	Peptidase, M23/M37 family; Identified by similarity to SP:P75942; match to protein family HMM PF01551.	DNA processing protein DprA, putative; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	0.538
DVU_0517	DVU_2768	DVU_0517	DVU_2768	Peptidase, M23/M37 family; Identified by similarity to SP:P75942; match to protein family HMM PF01551.	comF family protein; Identified by similarity to SP:P31773.	0.703
DVU_0710	DVU_0512	DVU_0710	DVU_0512	Competence protein comM, putative; Identified by similarity to SP:P45049; match to protein family HMM PF01078; match to protein family HMM TIGR00368.	Flagellar basal-body rod protein, putative; Identified by similarity to SP:P75939; match to protein family HMM PF00460; Belongs to the flagella basal body rod proteins family.	0.581
DVU_0710	DVU_0517	DVU_0710	DVU_0517	Competence protein comM, putative; Identified by similarity to SP:P45049; match to protein family HMM PF01078; match to protein family HMM TIGR00368.	Peptidase, M23/M37 family; Identified by similarity to SP:P75942; match to protein family HMM PF01551.	0.433
DVU_0710	DVU_0711	DVU_0710	DVU_0711	Competence protein comM, putative; Identified by similarity to SP:P45049; match to protein family HMM PF01078; match to protein family HMM TIGR00368.	Hypothetical protein; Identified by Glimmer2; putative.	0.548
DVU_0710	DVU_0833	DVU_0710	DVU_0833	Competence protein comM, putative; Identified by similarity to SP:P45049; match to protein family HMM PF01078; match to protein family HMM TIGR00368.	Conserved hypothetical protein TIGR00252; Identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252; Belongs to the UPF0102 family.	0.764
DVU_0710	DVU_2069	DVU_0710	DVU_2069	Competence protein comM, putative; Identified by similarity to SP:P45049; match to protein family HMM PF01078; match to protein family HMM TIGR00368.	DNA processing protein DprA, putative; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	0.853
DVU_0710	DVU_2768	DVU_0710	DVU_2768	Competence protein comM, putative; Identified by similarity to SP:P45049; match to protein family HMM PF01078; match to protein family HMM TIGR00368.	comF family protein; Identified by similarity to SP:P31773.	0.866
DVU_0710	DVU_3257	DVU_0710	DVU_3257	Competence protein comM, putative; Identified by similarity to SP:P45049; match to protein family HMM PF01078; match to protein family HMM TIGR00368.	DNA internalization-related competence protein ComEC/Rec2; Identified by similarity to SP:P39695; match to protein family HMM TIGR00360.	0.670
DVU_0710	def	DVU_0710	DVU_3366	Competence protein comM, putative; Identified by similarity to SP:P45049; match to protein family HMM PF01078; match to protein family HMM TIGR00368.	Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	0.703
DVU_0710	ruvC	DVU_0710	DVU_2258	Competence protein comM, putative; Identified by similarity to SP:P45049; match to protein family HMM PF01078; match to protein family HMM TIGR00368.	Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.	0.526
DVU_0710	tsf	DVU_0710	DVU_0873	Competence protein comM, putative; Identified by similarity to SP:P45049; match to protein family HMM PF01078; match to protein family HMM TIGR00368.	Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.	0.462
DVU_0711	DVU_0710	DVU_0711	DVU_0710	Hypothetical protein; Identified by Glimmer2; putative.	Competence protein comM, putative; Identified by similarity to SP:P45049; match to protein family HMM PF01078; match to protein family HMM TIGR00368.	0.548
DVU_0833	DVU_0710	DVU_0833	DVU_0710	Conserved hypothetical protein TIGR00252; Identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252; Belongs to the UPF0102 family.	Competence protein comM, putative; Identified by similarity to SP:P45049; match to protein family HMM PF01078; match to protein family HMM TIGR00368.	0.764

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